PCI-Express

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PCI-E is point to point

1 lane PCIE

36 contacts arranged in two rows of 18 contacts

  1. A clock pait REFCLK
  2. Receive pair PER
  3. Transmit pair PET

PCI-E stack

  1. Physical layer - Pin toggling, 8b/10b encoding/decoding, lane disassembly/reassembly
  2. Data link layer - Data integrity is checked, packets are re-transmitted if required
  3. Transaction layer - User layer

Reading

  1. https://pcisig.com/sites/default/files/files/PCI_Express_Basics_Background.pdf

You might want to investigate;

And a bit more peripherally related (USB3);